Description
PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner.
The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data). Through integration with and , there is some support for the subsequent visualization, annotation and storage of results.
Home page
Documentation
License
PLINK is free to use under the .
Usage
Use
module avail PLINK
to see which versions of PLINK are available. Use
module load PLINK/version
to get access to PLINK.
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